Publications
2024
The unreasonable effectiveness of equilibrium gene regulation through the cell cycle
Cell Syst. 2024 Jul 17;15(7):639-648.e2. doi: 10.1016/j.cels.2024.06.002. Epub 2024 Jul 8. PMID: 38981487.
From molecular mechanisms of prostate cancer to translational applications: based on multi-omics fusion analysis and intelligent medicine
Review. Health Inf Sci Syst. 2024.12(1):6. Doi: 10.1007/s13755-023-00264-5.
pH-Dependent Interactions of Coacervate Forming Histidine-rich Peptide with Model Lipid Membranes.
Front. Soft Matter, 19 January 2024 Sec. Biological Soft Matter Volume 3 - 2023 Doi: 10.3389/frsfm.2023.1339496
Proteomics profiling reveals lipid metabolism abnormalities during oogenesis in unexplained recurrent pregnancy loss
Front Immunol. 2024 Aug 8;15:1397633. doi: 10.3389/fimmu.2024.1397633. PMID: 39176081; PMCID: PMC11339622.
Extrusion-Based 3D Printing of Photocrosslinkable Chitosan Inks
Gels. 2024 Feb 4;10(2):126. doi: 10.3390/gels10020126. PMID: 38391456; PMCID: PMC10888165.
The molecular architecture of the nuclear basket
Cell 187, 1–15, September 19, 2024
Supramolecular chemistry in solution and solid–gas interfaces: Synthesis and Photophysical Properties of Monocolor and Bicolor Fluorescent Sensors for Barium Tagging in Neutrinoless Double Beta DecayDecay
RSC Appl. Interfaces, 2024. DOI 10.1039/D4LF00227J
Cryo-EM structure of Rev1-Polζ holocomplex reveals the mechanism of their cooperativity in translesion DNA synthesis
Nat Struct Mol Biol. 2024 May 8. doi: 10.1038/s41594-024-01302-w. Epub ahead of print. PMID: 38720088.
A deep learning method that identifies cellular heterogeneity using nanoscale nuclear features
Nat Mach Intell. 2024;6(9):1021-1033. doi: 10.1038/s42256-024-00883-x. Epub 2024 Aug 27. PMID: 39309215; PMCID: PMC11415298.
On the Evolutionary Development of Biological Organization from Complex Prebiotic Chemistry
Book Chapter. In: Mossio, M. (eds) Organization in Biology. History, Philosophy and Theory of the Life Sciences, vol 33. Springer, Cham. Doi: 10.1007/978-3-031-38968-9_9
Evaluation of Various Types of Alginate Inks for Light-Mediated Extrusion 3D Printing
Polymers (Basel). 2024 Apr 4;16(7):986. doi: 10.3390/polym16070986. PMID: 38611244; PMCID: PMC11014002.
Ecological, genetic and geographical divergence explain differences in colouration among sunbird species (Nectariniidae)
Ecol Evol. 2024 Sep 11;14(9):e11427. doi: 10.1002/ece3.11427. PMID: 39263465; PMCID: PMC11387724.
Implementation of IFPTML Computational Models in Drug Discovery Against Flaviviridae Family
J Chem Inf Model. 2024 Mar 25;64(6):1841-1852. doi: 10.1021/acs.jcim.3c01796. Epub 2024 Mar 11. PMID: 38466369; PMCID: PMC10966645.
A deep learning method that identifies cellular heterogeneity using nanoscale nuclear features
Nat Mach Intell (2024). https://doi.org/10.1038/s42256-024-00883-x
APOE and familial hypercholesterolemia
Curr Opin Lipidol. 2024 Apr 17. doi: 10.1097/MOL.0000000000000937. Epub ahead of print. PMID: 38640077.
Limitations of human brain organoids to study neurodegenerative diseases: a manual to survive.
Front Cell Neurosci. 2024 Jul 9;18:1419526. doi: 10.3389/fncel.2024.1419526. PMID: 39049825; PMCID: PMC11267621.
Anti-miR-873-5p improves alcohol-related liver disease by enhancing hepatic deacetylation via SIRT1 disease
JHEP Rep. 2024. 6(1):100918. Doi: 10.1016/j.jhepr.2023.100918
Vesicle-vesicle fusion promoted by the ATG8 autophagy protein LC3C: relevance of the N-terminal region.
Autophagy. 2024 May 31:1-3. doi: 10.1080/15548627.2024.2359354. Epub ahead of print. PMID: 38818767.
Conformational adaptation and large amplitude motions of 1-phenyl-2,2,2-trifluoroethanol with two water molecules: a rotational spectroscopic and ab initio investigation
Phys Chem Chem Phys. 2024 Jul 3;26(26):18067-18075. doi: 10.1039/d4cp01516a. PMID: 38895791.
SUMOylation controls Hu antigen R posttranscriptional activity in liver cancer
Cell Rep. 2024 Mar 26;43(3):113924. doi: 10.1016/j.celrep.2024.113924. Epub 2024 Mar 18. PMID: 38507413.
Viroporin-like activity of the hairpin transmembrane domain of African swine fever virus B169L protein
J Virol. 2024 Aug 20;98(8):e0023124. doi: 10.1128/jvi.00231-24. Epub 2024 Jul 9. PMID: 38980063; PMCID: PMC11334534.
On the antimicrobial properties and endurance of eugenol and 2-phenylphenol functionalized sol-gel coatings
Heliyon. 2024 Apr 3;10(8):e29146. doi: 10.1016/j.heliyon.2024.e29146. PMID: 38628759; PMCID: PMC11016974.
Multifunctional curcumin-based polymer coating: A promising platform against bacteria, inflammation and coagulation
Colloids Surf B Biointerfaces. 2024 Sep;241:114048. doi: 10.1016/j.colsurfb.2024.114048. Epub 2024 Jun 22. PMID: 38954936.
Ceramide regulation of autophagy: A biophysical approach
Biochim Biophys Acta Mol Cell Biol Lipids . 2024 Mar;1869(2):159444
On the additive artificial intelligence-based discovery of nanoparticle neurodegenerative disease drug delivery systems
Beilstein J Nanotechnol. 2024 May 15;15:535-555. doi: 10.3762/bjnano.15.47. PMID: 38774585; PMCID: PMC11106676.
Morphological and Biophysical Study of S100A9 Protein Fibrils by Atomic Force Microscopy Imaging and Nanomechanical Analysis
Biomolecules. 2024 Aug 31;14(9):1091. doi: 10.3390/biom14091091. PMID: 39334857; PMCID: PMC11429797.
The Influence of Lipid Electric Charge on the Binding of Aβ(1-42) Amyloid Peptide to Bilayers in the Liquid-Ordered State
Biomolecules. 2024 Mar 1;14(3):298. doi: 10.3390/biom14030298. PMID: 38540718; PMCID: PMC10967883.
Automated fiducial-based alignment of cryo-electron tomography tilt series in Dynamo
Structure. 2024 Jul 22:S0969-2126(24)00241-7. doi: 10.1016/j.str.2024.07.003. Epub ahead of print. PMID: 39079528.
Unlocking a new hydrogen-bonding marker: C-O bond shortening in vicinal diols revealed by rotational spectroscopy
J Chem Phys. 2024 Apr 21;160(15):154304. doi: 10.1063/5.0203123. PMID: 38624119.
EMhub: a web platform for data management and on-the-fly processing in scientific facilities
Acta Crystallogr D Struct Biol. 2024 Nov 1. doi: 10.1107/S2059798324009471. Epub ahead of print. PMID: 39373194.
Fluorescence microscopy shadow imaging for neuroscience
Front Cell Neurosci. 2024 Feb 15;18:1330100. doi: 10.3389/fncel.2024.1330100. PMID: 38425431; PMCID: PMC10902105.
Computational method for designing vaccines applied to virus-like particles (VLPs) as epitope carriers
Vaccine. 2024 May 22:S0264-410X(24)00584-X. doi: 10.1016/j.vaccine.2024.05.025. Epub ahead of print. PMID: 38782665.
Generation of a Nonbilayer Lipid Nanoenvironment after Epitope Binding Potentiates Neutralizing HIV-1 MPER Antibody
ACS Appl Mater Interfaces. 2024 Oct 24. doi: 10.1021/acsami.4c13353. Epub ahead of print. PMID: 39446590.
Warfarin-A natural anticoagulant: A review of research trends for precision medication
Phytomedicine. 2024 Feb 23;128:155479. doi: 10.1016/j.phymed.2024.155479. Epub ahead of print. PMID: 38493714.
(1-Deoxy)ceramides in bilayers containing sphingomyelin and cholesterol
Colloids Surf B Biointerfaces. 2024 Aug 8;243:114155. doi: 10.1016/j.colsurfb.2024.114155. Epub ahead of print. PMID: 39137529.
Architecture, Function, Regulation, and Evolution of α-Glucans Metabolic Enzymes in Prokaryotes
REVIEW. Chem Rev. 2024 Apr 24;124(8):4863-4934. doi: 10.1021/acs.chemrev.3c00811. Epub 2024 Apr 12. PMID: 38606812; PMCID: PMC11046441.
Fission of Double-Membrane Tubes under Tension
Biophys J. 2024 Oct 14:S0006-3495(24)00681-7. doi: 10.1016/j.bpj.2024.10.009. Epub ahead of print. PMID: 39410713.
The N-terminal region of the ATG8 autophagy protein LC3C is essential for its membrane fusion properties
Int J Biol Macromol. 2024 Feb 1;262(Pt 1):129835. doi: 10.1016/j.ijbiomac.2024.129835. Epub ahead of print. PMID: 38302024.
Interplay between hippocampal TACR3 and systemic testosterone in regulating anxiety-associated synaptic plasticity.
Mol Psychiatry. 2024 Mar;29(3):686-703. doi: 10.1038/s41380-023-02361-z. Epub 2023 Dec 22. PMID: 38135756; PMCID: PMC11153148.
A resurrected ancestor of Cas12a expands target access and substrate recognition for nucleic-acid editing and detection
Nat Biotechnol. 2024 Oct 31. doi: 10.1038/s41587-024-02461-3. Epub ahead of print. PMID: 39482449.