Publications
2024
MLe-KCNQ2: An Artificial Intelligence Model for the Prognosis of Missense KCNQ2 Gene Variants
Int J Mol Sci. 2024 Mar 2;25(5):2910. doi: 10.3390/ijms25052910. PMID: 38474157; PMCID: PMC10932340.
Structural and biochemical characterization of the C-terminal region of the human RTEL1 helicase
Protein Sci. 2024 Sep;33(9):e5093. doi: 10.1002/pro.5093. PMID: 39180489.
Editorial: Human brain organoids to model neurodegenerative diseases at the BOSS23 Brain Organoid Summer School
Editorial. Front Cell Neurosci. 2024 Nov 5;18:1501036. doi: 10.3389/fncel.2024.1501036. PMID: 39564190; PMCID: PMC11573503.
Interfacial Stresses on Droplet Interface Bilayers Using Two Photon Fluorescence Lifetime Imaging Microscopy
J Colloid Interface Sci. 2024 Jan;653(Pt B):1196-1204. Doi: 10.1016/j.jcis.2023.09.092.
Structural effects of oxidation on sugars: glucose as a precursor of gluconolactone and glucuronolactone
Chem Commun (Camb). 2024 Apr 25. doi: 10.1039/d4cc00735b. Epub ahead of print. PMID: 38661549.
Advancing Food Packaging: Exploring Cyto-Toxicity of Shape Memory Polyurethanes
Materials (Basel). 2024 Sep 28;17(19):4770. doi: 10.3390/ma17194770. PMID: 39410342; PMCID: PMC11478179.
A two-step mechanism for the binding of the HIV-1 MPER epitope by the 10E8 antibody onto biosensor-supported lipid bilayers
FEBS Lett. 2024 Feb 9. doi: 10.1002/1873-3468.14814. Epub ahead of print. PMID: 38339834.
Multi-Endpoint Acute Toxicity Assessment of Organic Compounds Using Large-Scale Machine Learning Modeling
Environ Sci Technol. 2024 Jun 11;58(23):10116-10127. doi: 10.1021/acs.est.4c01017. Epub 2024 May 26. PMID: 38797941.
Purification of functional recombinant human mitochondrial Hsp60
Methods Enzymol. 2024;707:423-440. doi: 10.1016/bs.mie.2024.07.049. Epub 2024 Aug 31. PMID: 39488385.
Identification of Riluzole derivatives as novel calmodulin inhibitors with neuroprotective activity by a joint synthesis, biosensor, and computational guided strategy.
Biomed Pharmacother. 2024 Apr 17;174:116602
Tutorial: fluorescence lifetime microscopy ofmembrane mechanosensitive Flipper probes
Nat Protoc. 2024 Aug 29. doi: 10.1038/s41596-024-01027-6. Epub ahead of print. PMID: 39210094.
Learning Gaze-aware Compositional GAN from Limited Annotations
Proceedings of the ACM on Computer Graphics and Interactive Techniques. 2024 May 17; Volume 7, Issue 2. DOI: 10.1145/3654706
Liposome-based peptide vaccines to elicit immune responses against the membrane active domains of the HIV-1 Env glycoprotein
Review. Biochim Biophys Acta Biomembr. 2024 Jan;1866(1):184235. Doi: 10.1016/j.bbamem.2023.184235
4-Hydroxybenzoic acid rescues multisystemic disease and perinatal lethality in a mouse model of mitochondrial disease
Cell Rep. 2024 Apr 26:114148. doi: 10.1016/j.celrep.2024.114148. Epub ahead of print. PMID: 38697100.
Exploring atmospheric nucleation processes: Hydration and fluoroalcoholic complexation of pyruvic acid
J Chem Phys. 2024 Oct 14;161(14):144311. doi: 10.1063/5.0230352. PMID: 39399966.
A progesterone derivative linked to a stable phospholipid activates breast cancer cell response without leaving the cell membrane
Cell Mol Life Sci. 2024 Feb 22;81(1):98. doi: 10.1007/s00018-024-05116-3. PMID: 38386110; PMCID: PMC10884080.
Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun. 2024 Jun 15;15(1):5123. doi: 10.1038/s41467-024-48802-3. PMID: 38879612.
Machine learning guided prediction of warfarin blood levels for personalized medicine based on clinical longitudinal data from cardiac surgery patients: a prospective observational study
Int J Surg. 2024 Jun 4;110(10):6528–40. doi: 10.1097/JS9.0000000000001734. Epub ahead of print. PMID: 38833337; PMCID: PMC11487003.
Naturalize Revolution: Unprecedented AI-Driven Precision in Skin Cancer Classification Using Deep Learning
BioMedInformatics 2024, 4, 638-660. Doi: 10.3390/biomedinformatics4010035
The surface charge of electroactive materials governs cell behaviour through its effect on protein deposition
Acta Biomater. 2024 Aug;184:201-209. doi: 10.1016/j.actbio.2024.06.039. Epub 2024 Jun 29. PMID: 38950807.
Modulatory effects of CNNM4 on Protein-L-Isoaspartyl-O-Methyltransferase repair function during Alcohol-Induced hepatic damage
Hepatology. 2024 Dec 6. doi: 10.1097/HEP.0000000000001156. Epub ahead of print. PMID: 39641635.
Allosteric control of dynamin-related protein 1 through a disordered C-terminal Short Linear Motif
Nat Commun 15, 52. 2024. Doi:10.1038/s41467-023-44413-6
A Targetable N-Terminal Motif Orchestrates α-Synuclein Oligomer-to-Fibril Conversion
J Am Chem Soc. 2024 Apr 29. doi: 10.1021/jacs.4c02262. Epub ahead of print. PMID: 38683963.
Nucleocytoplasmic transport senses mechanical forces independently of cell density in cell monolayers
J Cell Sci. 2024 Sep 1;137(17):jcs262363. doi: 10.1242/jcs.262363. Epub 2024 Sep 9. PMID: 39120491; PMCID: PMC11423809.
The evolution of multiple colour mechanisms is correlated with diversification in sunbirds (Nectariniidae)
Syst Biol. 2024 Jan 30:syae006. doi: 10.1093/sysbio/syae006. Epub ahead of print. PMID: 38289860.
PCNA molecular recognition of different PIP motifs: Role of Tyr211 phosphorylation
Int J Biol Macromol. 2024 Jun 14:133187. doi: 10.1016/j.ijbiomac.2024.133187. Epub ahead of print. PMID: 38880460.
Enhancing MRI brain tumor classification: A comprehensive approach integrating real-life scenario simulation and augmentation techniques
Phys Med. 2024 Nov 2;127:104841. doi: 10.1016/j.ejmp.2024.104841. Epub ahead of print. PMID: 39488993.
Transformer-based fall detection in videos
Engineering Applications of Artificial Intelligence, Volume 132, 2024, 107937. Doi: 10.1016/j.engappai.2024.107937
Shape and interactions of the synthetic repellent DEET
Phys Chem Chem Phys. 2024 Sep 12. doi: 10.1039/d4cp02315c
Modulatory effects of CNNM4 on Protein-L-Isoaspartyl-O-Methyltransferase repair function during Alcohol-Induced hepatic damage
Hepatology. 2024 Dec 6. doi: 10.1097/HEP.0000000000001156. Epub ahead of print. PMID: 39641635.
OptiMo-LDLr: An Integrated In Silico Model with Enhanced Predictive Power for LDL Receptor Variants, Unraveling Hot Spot Pathogenic Residues
Adv Sci (Weinh). 2024 Jan 23:e2305177. doi: 10.1002/advs.202305177.
DL4MicEverywhere: Deep learning for microscopy made flexible, shareable, and reproducible
Nat Methods. 2024 May 17. doi: 10.1038/s41592-024-02295-6. Epub ahead of print. PMID: 38760611.
Towards self-conscious AI using deep ImageNet models: Application to blood cell classification
Mach. Learn. Knowl. Extr. 2024, 6(4), 2400-2421.
Membrane fission via transmembrane contact
Nat Commun. 2024 Mar 30;15(1):2793. doi: 10.1038/s41467-024-47122-w.
Pseudophosphorylation of single residues of the J-domain of DNAJA2 regulates the holding/folding balance of the Hsc70 system
Protein Sci. 2024 Aug;33(8):e5105. doi: 10.1002/pro.5105. PMID: 39012012; PMCID: PMC11249846.
Machine learning analysis of a large set of homopolymers to predict glass transition temperatures
Commun Chem. 2024 Oct 2;7(1):226. doi: 10.1038/s42004-024-01305-0. PMID: 39358434; PMCID: PMC11447034.
On the geometric and analytical properties of the anharmonic oscillator
Communications in Nonlinear Science and Numerical Simulation, Volume 131, 2024,
107875. Doi: 10.1016/j.cnsns.2024.107875Structural basis for regulation of a CBASS-CRISPR-Cas defense island by a transmembrane anti-σ factor and its ECF σ partner
Sci Adv. 2024 Oct 25;10(43):eadp1053. doi: 10.1126/sciadv.adp1053. Epub 2024 Oct 25. PMID: 39454004; PMCID: PMC11506125.
Selective cargo and membrane recognition by SNX17 regulates its interaction with Retriever
EMBO Rep. 2024 Dec 9. doi: 10.1038/s44319-024-00340-1. Epub ahead of print. PMID: 39653850.
MATEO: InterMolecular α-Amidoalkylation Theoretical Enantioselectivity Optimization. Online Tool for Selection and Design of Chiral Catalysts and Products
J Cheminform 16, 9. 2024. Doi:10.1186/s13321-024-00802-7